Gene detail information of Glyur000152s00012698.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G07900.14.00E-43Mitochondrial transcription termination factor family protein
NRXP_004516712.11.26E-137PREDICTED: uncharacterized protein LOC101499055 isoform X1 [Cicer arietinum]
trEMBLtr|A0A072V5D1|A0A072V5D1_MEDTR9.00E-136mTERF protein {ECO:0000313|EMBL:KEH37234.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001527327274114-


Gene family

Gene familysubfamily
Transcription Factors FamilymTERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005739  mitochondrion


molecular_function

GO:0003690  double-stranded DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000152s00012698.1PF02536.9mTERF21412.70E-12
Glyur000152s00012698.1PF02536.9mTERF1512556.50E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.617
SRR1783600control8.792
SRR1783602moderate drought stress8.215
SRR1811619moderate drought stress6.766

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.385
DRR006520Root Summer glycyrrhizin high producing strain8.052
DRR006521Root Winter glycyrrhizin high producing strain2.205
DRR006522Root Winter glycyrrhizin high producing strain1.836
DRR006523Root Summer glycyrrhizin low producing strain8.477
DRR006524Root Summer glycyrrhizin low producing strain8.617
DRR006525Leaf Summer glycyrrhizin high producing strain2.044
DRR006526Leaf Summer glycyrrhizin high producing strain2.437

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.442
SRR2868004Drought Stress(Tissue:root)6.769
SRR2967015Control (Tissue:root)6.553

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.323
SRR9715740Leave9.121
SRR9715741Leave5.438
SRR9715739Root10.822
SRR9715742Root9.980
SRR9715743Root11.035

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.739
SRR8749028MeJA induced 9h5.721
SRR8749029MeJA induced 9h2.182
SRR8749030Uninduced2.243
SRR8749031Uninduced1.425
SRR8749032Uninduced1.478

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.096
SRR8400027Control-Root8.027

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved