Gene detail information of Glyur000152s00012719.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G15880.14.00E-82Cysteine proteinases superfamily protein
NRXP_004487849.10PREDICTED: ubiquitin-like-specific protease ESD4-like [Cicer arietinum]
Swissprottr|Q94F30|ESD4_ARATH2.00E-124Ubiquitin-like-specific protease ESD4
trEMBLtr|A0A072V5F5|A0A072V5F5_MEDTR4.00E-171Ubiquitin-like-specific protease ESD4-like protein {ECO:0000313|EMBL:KEH37254.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00152202562210566+


Gene family

Gene familysubfamily
Ubiquitin FamilyULP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008234  cysteine-type peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000152s00012719.1PF02902.14Peptidase_C483134446.80E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.218
SRR1783600control16.383
SRR1783602moderate drought stress18.277
SRR1811619moderate drought stress18.263

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.134
DRR006520Root Summer glycyrrhizin high producing strain17.731
DRR006521Root Winter glycyrrhizin high producing strain12.693
DRR006522Root Winter glycyrrhizin high producing strain12.182
DRR006523Root Summer glycyrrhizin low producing strain24.328
DRR006524Root Summer glycyrrhizin low producing strain23.887
DRR006525Leaf Summer glycyrrhizin high producing strain12.239
DRR006526Leaf Summer glycyrrhizin high producing strain12.349

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.760
SRR2868004Drought Stress(Tissue:root)18.006
SRR2967015Control (Tissue:root)20.201

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.725
SRR9715740Leave23.636
SRR9715741Leave26.100
SRR9715739Root12.259
SRR9715742Root20.775
SRR9715743Root23.211

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.199
SRR8749028MeJA induced 9h21.093
SRR8749029MeJA induced 9h12.541
SRR8749030Uninduced14.898
SRR8749031Uninduced8.042
SRR8749032Uninduced6.378

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.478
SRR8400027Control-Root18.779

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved