Gene detail information of Glyur000153s00013686.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G08680.20Leucine-rich repeat protein kinase family protein
NRXP_004490727.10PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum]
COGYP_001192956.15.00E-20two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|Q9LVM0|Y5830_ARATH0Probable inactive receptor kinase At5g58300 (Precursor)
trEMBLtr|G7K0V8|G7K0V8_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES99013.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00153103631108870-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000153s00013686.1PF08263.7LRRNT_247852.20E-06
Glyur000153s00013686.1PF13855.1LRR_81011506.60E-09
Glyur000153s00013686.1PF00560.28LRR_12062270.0081
Glyur000153s00013686.1PF00069.20Pkinase3586202.60E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.224
SRR1783600control7.289
SRR1783602moderate drought stress3.431
SRR1811619moderate drought stress3.529

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.879
DRR006520Root Summer glycyrrhizin high producing strain4.904
DRR006521Root Winter glycyrrhizin high producing strain0.413
DRR006522Root Winter glycyrrhizin high producing strain0.403
DRR006523Root Summer glycyrrhizin low producing strain6.411
DRR006524Root Summer glycyrrhizin low producing strain6.588
DRR006525Leaf Summer glycyrrhizin high producing strain2.655
DRR006526Leaf Summer glycyrrhizin high producing strain2.715

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.360
SRR2868004Drought Stress(Tissue:root)17.057
SRR2967015Control (Tissue:root)16.122

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.098
SRR9715740Leave3.330
SRR9715741Leave4.049
SRR9715739Root6.140
SRR9715742Root7.683
SRR9715743Root6.917

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.304
SRR8749028MeJA induced 9h4.597
SRR8749029MeJA induced 9h2.658
SRR8749030Uninduced1.561
SRR8749031Uninduced0.085
SRR8749032Uninduced0.421

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.301
SRR8400027Control-Root21.817

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved