Gene detail information of Glyur000153s00013692.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58280.1 | 2.00E-28 | AP2/B3-like transcriptional factor family protein |
| NR | KHN41001.1 | 1.08E-157 | Putative B3 domain-containing protein [Glycine soja] |
| Swissprot | tr|Q9FHB2|Y5828_ARATH | 6.00E-50 | Putative B3 domain-containing protein At5g58280 |
| trEMBL | tr|K7KAC9|K7KAC9_SOYBN | 9.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G40400.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00153 | 152844 | 158284 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000153s00013692.1 | PF02362.16 | B3 | 127 | 202 | 9.40E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.866 |
| SRR1783600 | control | 7.939 |
| SRR1783602 | moderate drought stress | 7.613 |
| SRR1811619 | moderate drought stress | 7.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.539 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.245 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.758 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.710 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.419 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.502 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.108 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.101 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.205 |
| SRR2967015 | Control (Tissue:root) | 5.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.613 |
| SRR9715740 | Leave | 4.198 |
| SRR9715741 | Leave | 6.120 |
| SRR9715739 | Root | 0.735 |
| SRR9715742 | Root | 4.548 |
| SRR9715743 | Root | 3.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.929 |
| SRR8749028 | MeJA induced 9h | 2.008 |
| SRR8749029 | MeJA induced 9h | 4.136 |
| SRR8749030 | Uninduced | 0.330 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.236 |
| SRR8400027 | Control-Root | 16.515 |