Gene detail information of Glyur000154s00013400.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G22070.12.00E-121Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
NRXP_007150010.10hypothetical protein PHAVU_005G118300g [Phaseolus vulgaris]
trEMBLtr|V7BVL8|V7BVL8_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW22004.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001545998561121+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGTnc


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0008375  acetylglucosaminyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000154s00013400.1PF02485.16Branch942013.70E-27
Glyur000154s00013400.1PF02485.16Branch2203451.40E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control59.618
SRR1783600control60.197
SRR1783602moderate drought stress33.009
SRR1811619moderate drought stress36.790

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.907
DRR006520Root Summer glycyrrhizin high producing strain24.617
DRR006521Root Winter glycyrrhizin high producing strain9.048
DRR006522Root Winter glycyrrhizin high producing strain9.259
DRR006523Root Summer glycyrrhizin low producing strain29.823
DRR006524Root Summer glycyrrhizin low producing strain30.558
DRR006525Leaf Summer glycyrrhizin high producing strain10.758
DRR006526Leaf Summer glycyrrhizin high producing strain10.922

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.925
SRR2868004Drought Stress(Tissue:root)16.400
SRR2967015Control (Tissue:root)20.394

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.263
SRR9715740Leave3.961
SRR9715741Leave3.995
SRR9715739Root17.961
SRR9715742Root20.221
SRR9715743Root18.684

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.802
SRR8749028MeJA induced 9h19.407
SRR8749029MeJA induced 9h13.591
SRR8749030Uninduced7.418
SRR8749031Uninduced3.162
SRR8749032Uninduced5.191

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.499
SRR8400027Control-Root30.148

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved