Gene detail information of Glyur000155s00012788.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55010.23.00E-88phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
NRKHN34089.11.25E-128Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [Glycine soja]
COGYP_002509951.11.00E-63phosphoribosylformylglycinamidine cyclo-ligase [Halothermothrix orenii H 168]
Swissprottr|P52424|PUR5_VIGUN1.00E-128Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|I1K506|I1K506_SOYBN5.00E-129Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|RuleBase:RU004370}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001555031429+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01933purM EC:6.3.3.1 Purine metabolism map00230


Gene Ontology

biological_process

GO:0006189  'de novo' IMP biosynthetic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003824  catalytic activity

GO:0004641  phosphoribosylformylglycinamidine cyclo-ligase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000155s00012788.1PF02769.17AIRS_C361952.80E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.765
SRR1783600control10.828
SRR1783602moderate drought stress8.219
SRR1811619moderate drought stress7.927

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.775
DRR006520Root Summer glycyrrhizin high producing strain22.987
DRR006521Root Winter glycyrrhizin high producing strain24.524
DRR006522Root Winter glycyrrhizin high producing strain24.304
DRR006523Root Summer glycyrrhizin low producing strain23.156
DRR006524Root Summer glycyrrhizin low producing strain22.507
DRR006525Leaf Summer glycyrrhizin high producing strain9.140
DRR006526Leaf Summer glycyrrhizin high producing strain9.093

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.645
SRR2868004Drought Stress(Tissue:root)22.037
SRR2967015Control (Tissue:root)19.693

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.200
SRR9715740Leave13.894
SRR9715741Leave7.531
SRR9715739Root14.268
SRR9715742Root17.850
SRR9715743Root14.831

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.351
SRR8749028MeJA induced 9h16.394
SRR8749029MeJA induced 9h22.807
SRR8749030Uninduced13.031
SRR8749031Uninduced9.429
SRR8749032Uninduced19.625

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.459
SRR8400027Control-Root17.722

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved