Gene detail information of Glyur000155s00012798.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G53570.42.00E-144mitogen-activated protein kinase kinase kinase 3
NRXP_004503937.10PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Cicer arietinum]
COGNP_869262.13.00E-28serine/threonine-protein kinase pknH [Rhodopirellula baltica SH 1]
Swissprottr|Q9CAD5|YODA_ARATH2.00E-142Mitogen-activated protein kinase kinase kinase YODA
trEMBLtr|Q75PK5|Q75PK5_LOTJA0Mitogen-activated kinase kinase kinase alpha {ECO:0000313|EMBL:BAD12492.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001555702463012-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000155s00012798.1PF00069.20Pkinase2224781.00E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.179
SRR1783600control34.168
SRR1783602moderate drought stress34.571
SRR1811619moderate drought stress34.286

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.502
DRR006520Root Summer glycyrrhizin high producing strain33.644
DRR006521Root Winter glycyrrhizin high producing strain70.613
DRR006522Root Winter glycyrrhizin high producing strain68.910
DRR006523Root Summer glycyrrhizin low producing strain51.745
DRR006524Root Summer glycyrrhizin low producing strain52.454
DRR006525Leaf Summer glycyrrhizin high producing strain35.041
DRR006526Leaf Summer glycyrrhizin high producing strain34.364

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.012
SRR2868004Drought Stress(Tissue:root)31.204
SRR2967015Control (Tissue:root)39.323

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave50.538
SRR9715740Leave38.725
SRR9715741Leave60.604
SRR9715739Root16.165
SRR9715742Root71.581
SRR9715743Root59.584

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h50.980
SRR8749028MeJA induced 9h71.250
SRR8749029MeJA induced 9h76.354
SRR8749030Uninduced68.097
SRR8749031Uninduced67.305
SRR8749032Uninduced50.099

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.242
SRR8400027Control-Root39.513

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved