Gene detail information of Glyur000155s00012802.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G09330.42.00E-74NAC domain containing protein 82
NRXP_007159836.11.39E-153hypothetical protein PHAVU_002G271700g [Phaseolus vulgaris]
Swissprottr|Q84K00|NAC78_ARATH2.00E-73NAC domain-containing protein 78
trEMBLtr|V7CRD6|V7CRD6_PHAVU5.00E-154Uncharacterized protein {ECO:0000313|EMBL:ESW31830.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0015598550101890-


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000155s00012802.1PF02365.10NAM61341.20E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.184
SRR1783600control23.948
SRR1783602moderate drought stress17.469
SRR1811619moderate drought stress17.261

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain47.653
DRR006520Root Summer glycyrrhizin high producing strain46.396
DRR006521Root Winter glycyrrhizin high producing strain14.945
DRR006522Root Winter glycyrrhizin high producing strain14.354
DRR006523Root Summer glycyrrhizin low producing strain41.650
DRR006524Root Summer glycyrrhizin low producing strain41.132
DRR006525Leaf Summer glycyrrhizin high producing strain23.617
DRR006526Leaf Summer glycyrrhizin high producing strain23.082

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.419
SRR2868004Drought Stress(Tissue:root)40.330
SRR2967015Control (Tissue:root)45.037

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave37.245
SRR9715740Leave38.121
SRR9715741Leave39.740
SRR9715739Root11.188
SRR9715742Root28.931
SRR9715743Root26.417

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h95.171
SRR8749028MeJA induced 9h73.395
SRR8749029MeJA induced 9h70.314
SRR8749030Uninduced80.626
SRR8749031Uninduced61.459
SRR8749032Uninduced61.921

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.527
SRR8400027Control-Root37.939

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved