Gene detail information of Glyur000155s00012823.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18680.1 | 1.00E-125 | Amino acid kinase family protein |
| NR | XP_004503953.1 | 0 | PREDICTED: uridylate kinase-like [Cicer arietinum] |
| COG | YP_003887595.1 | 3.00E-109 | uridylate kinase [Cyanothece sp. PCC 7822] |
| Swissprot | tr|P49080|AKH2_MAIZE | 1.00E-06 | Homoserine dehydrogenase (Precursor) |
| trEMBL | tr|I1K4X3|I1K4X3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G32340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00155 | 237537 | 240273 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K09903 | pyrH | EC:2.7.4.22 | Pyrimidine metabolism | map00240 |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000155s00012823.1 | PF00696.23 | AA_kinase | 86 | 295 | 4.10E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.661 |
| SRR1783600 | control | 11.299 |
| SRR1783602 | moderate drought stress | 10.124 |
| SRR1811619 | moderate drought stress | 9.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.402 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.823 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.712 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.616 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.237 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.821 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.774 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 21.605 |
| SRR2868004 | Drought Stress(Tissue:root) | 18.629 |
| SRR2967015 | Control (Tissue:root) | 23.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 23.302 |
| SRR9715740 | Leave | 30.808 |
| SRR9715741 | Leave | 24.214 |
| SRR9715739 | Root | 4.032 |
| SRR9715742 | Root | 4.498 |
| SRR9715743 | Root | 3.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 80.580 |
| SRR8749028 | MeJA induced 9h | 40.078 |
| SRR8749029 | MeJA induced 9h | 60.208 |
| SRR8749030 | Uninduced | 9.874 |
| SRR8749031 | Uninduced | 7.147 |
| SRR8749032 | Uninduced | 11.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 16.845 |
| SRR8400027 | Control-Root | 12.514 |