Gene detail information of Glyur000156s00011993.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G48910.12.00E-114Flavin-containing monooxygenase family protein
NRKHN28240.10Flavin-containing monooxygenase YUCCA10 [Glycine soja]
COGYP_006875037.14.00E-67flavin-containing monooxygenase FMO [Emticicia oligotrophica DSM 17448]
Swissprottr|Q9FVQ0|YUC10_ARATH6.00E-139Probable indole-3-pyruvate monooxygenase YUCCA10
trEMBLtr|I1JQG5|I1JQG5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G36720.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0015699108113832-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11816YUCCA EC:1.14.13.168 Tryptophan metabolism map00380


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000156s00011993.2PF13738.1Pyr_redox_371532.50E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.396
SRR1783600control0.496
SRR1783602moderate drought stress0.364
SRR1811619moderate drought stress0.303

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.630
DRR006520Root Summer glycyrrhizin high producing strain2.561
DRR006521Root Winter glycyrrhizin high producing strain0.645
DRR006522Root Winter glycyrrhizin high producing strain0.540
DRR006523Root Summer glycyrrhizin low producing strain1.336
DRR006524Root Summer glycyrrhizin low producing strain1.439
DRR006525Leaf Summer glycyrrhizin high producing strain13.599
DRR006526Leaf Summer glycyrrhizin high producing strain12.828

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.727
SRR2868004Drought Stress(Tissue:root)2.126
SRR2967015Control (Tissue:root)2.573

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.214
SRR9715740Leave1.946
SRR9715741Leave8.623
SRR9715739Root0.077
SRR9715742Root0.702
SRR9715743Root0.808

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.373
SRR8749028MeJA induced 9h0.292
SRR8749029MeJA induced 9h0.185
SRR8749030Uninduced0.032
SRR8749031Uninduced0.000
SRR8749032Uninduced0.154

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.169
SRR8400027Control-Root3.973

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved