Gene detail information of Glyur000156s00011995.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36530.1 | 4.00E-12 | Enolase |
| NR | AFK45381.1 | 2.95E-16 | unknown [Medicago truncatula] |
| COG | YP_004088711.1 | 4.00E-13 | enolase [Asticcacaulis excentricus CB 48] |
| Swissprot | tr|Q42971|ENO_ORYSJ | 4.00E-16 | Enolase |
| trEMBL | tr|I3SYN9|I3SYN9_MEDTR | 1.00E-16 | Enolase {ECO:0000256|RuleBase:RU000654} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00156 | 108105 | 112784 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000156s00011995.1 | PF03952.11 | Enolase_N | 4 | 45 | 9.00E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.177 |
| SRR1783600 | control | 3.444 |
| SRR1783602 | moderate drought stress | 3.364 |
| SRR1811619 | moderate drought stress | 3.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.796 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.296 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.363 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.460 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.143 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.283 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.460 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.889 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.412 |
| SRR2967015 | Control (Tissue:root) | 1.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.532 |
| SRR9715740 | Leave | 4.711 |
| SRR9715741 | Leave | 5.421 |
| SRR9715739 | Root | 1.922 |
| SRR9715742 | Root | 1.602 |
| SRR9715743 | Root | 1.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.516 |
| SRR8749028 | MeJA induced 9h | 1.566 |
| SRR8749029 | MeJA induced 9h | 0.716 |
| SRR8749030 | Uninduced | 1.020 |
| SRR8749031 | Uninduced | 0.300 |
| SRR8749032 | Uninduced | 0.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.379 |
| SRR8400027 | Control-Root | 4.535 |