Gene detail information of Glyur000157s00015824.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G70000.21.00E-57myb-like transcription factor family protein
NRXP_003613473.13.79E-125DIV1B protein [Medicago truncatula]
Swissprottr|Q2V9B0|MY1R1_SOLTU6.00E-46Transcription factor MYB1R1
trEMBLtr|G7K6Z9|G7K6Z9_MEDTR1.00E-125MYB-like transcription factor family protein {ECO:0000313|EMBL:AES96431.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001577449176564+


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related
EAR motif-containing ProteinsMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003676  nucleic acid binding

GO:0003677  DNA binding

GO:0003682  chromatin binding

GO:0008270  zinc ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000157s00015824.1PF00249.26Myb_DNA-binding1011452.50E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.463
SRR1783600control28.213
SRR1783602moderate drought stress49.189
SRR1811619moderate drought stress49.388

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain38.988
DRR006520Root Summer glycyrrhizin high producing strain37.614
DRR006521Root Winter glycyrrhizin high producing strain80.926
DRR006522Root Winter glycyrrhizin high producing strain79.605
DRR006523Root Summer glycyrrhizin low producing strain23.652
DRR006524Root Summer glycyrrhizin low producing strain23.939
DRR006525Leaf Summer glycyrrhizin high producing strain37.514
DRR006526Leaf Summer glycyrrhizin high producing strain37.041

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.648
SRR2868004Drought Stress(Tissue:root)51.049
SRR2967015Control (Tissue:root)35.113

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave70.539
SRR9715740Leave102.912
SRR9715741Leave88.040
SRR9715739Root49.446
SRR9715742Root62.773
SRR9715743Root55.081

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.729
SRR8749028MeJA induced 9h36.105
SRR8749029MeJA induced 9h46.415
SRR8749030Uninduced7.484
SRR8749031Uninduced12.959
SRR8749032Uninduced37.170

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root65.195
SRR8400027Control-Root50.594

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved