Gene detail information of Glyur000157s00015826.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G10430.16.00E-177protein phosphatase 2A-2
NRXP_003519250.10PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Glycine max]
COGYP_001541554.16.00E-37metallophosphoesterase [Caldivirga maquilingensis IC-167]
Swissprottr|Q9ZSE4|PP2A_HEVBR0Serine/threonine-protein phosphatase PP2A catalytic subunit
trEMBLtr|I1JBU6|I1JBU6_SOYBN0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001579202396389-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04382PPP2C EC:3.1.3.16 mRNA surveillance pathway map03015
MAPK signaling pathway - flymap04013
TGF-beta signaling pathwaymap04350
Hippo signaling pathwaymap04390
Hippo signaling pathway -flymap04391
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Autophagy - animalmap04140
Autophagy - yeastmap04138
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Tight junctionmap04530
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728
Long-term depressionmap04730
Hepatitis Cmap05160
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000157s00015826.1PF00149.23Metallophos482403.50E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control58.869
SRR1783600control59.395
SRR1783602moderate drought stress46.318
SRR1811619moderate drought stress46.258

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain53.264
DRR006520Root Summer glycyrrhizin high producing strain52.595
DRR006521Root Winter glycyrrhizin high producing strain59.797
DRR006522Root Winter glycyrrhizin high producing strain58.342
DRR006523Root Summer glycyrrhizin low producing strain64.450
DRR006524Root Summer glycyrrhizin low producing strain64.435
DRR006525Leaf Summer glycyrrhizin high producing strain25.564
DRR006526Leaf Summer glycyrrhizin high producing strain25.273

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)67.084
SRR2868004Drought Stress(Tissue:root)83.129
SRR2967015Control (Tissue:root)62.101

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave70.712
SRR9715740Leave64.126
SRR9715741Leave82.327
SRR9715739Root71.453
SRR9715742Root78.587
SRR9715743Root79.107

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h62.679
SRR8749028MeJA induced 9h48.100
SRR8749029MeJA induced 9h65.587
SRR8749030Uninduced63.435
SRR8749031Uninduced55.409
SRR8749032Uninduced55.103

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root66.142
SRR8400027Control-Root68.449

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved