Gene detail

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Gene detail information of Glyur000157s00015833.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G59640.1	2.00E-70	BIG PETAL P
NR	XP_006573082.1	6.87E-128	PREDICTED: transcription factor bHLH79-like [Glycine max]
Swissprot	tr\|Q0JXE7\|BPE_ARATH	9.00E-66	Transcription factor BPE
trEMBL	tr\|I1J5H6\|I1J5H6_SOYBN	3.00E-128	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G04610.4}

Sequence

Transcript Sequence

>Glyur000157s00015833.1
AACGAAGAAAAAAAGGTGGAAGTGACTTGTGTTGGAACTCCCGAGGTGGGGGTCTCTAAAACAGTGAGAGTAATGGTGGACAGAGAAATACTATAACACACTTCCAAGGAGATCCATCACGCACGCACAAGTCGAGCTCAAAGAAAAAAAAACCAACCCGCATTCCCTCTCTCTATTACTAGTATATAAGTTGAACTTGAATGTTGATAGCACTCTTCCCTCGTTGTTGAGCTGGTGGTGGTGGTAGGGGTAGATTTGGTATTTCCAATCCTTCGATGGATCCGGCGGCGATTATGAACAACACGGCGTCGTTTCACCACCTGGCGGAGATCTGGCAGTTCCCTCCGGGAGAGTCCGGCGGCGGGCTTGGGCTTAGGAGGCCGCAGTTCGGCAACGGGTTCGGTGACTTCGCTTCGGGTCCGACCCGGGACGAACCGATAGGTTCGGAGCAGAGAACGGCGAACCATTGCCGGAAGAGGCGCGACTCCGAGGAGGAACCGGTTAAGGGCGTCTCCACCAGCAATGGCGGTGCCAATGGCAATGGCGTGAGTGATGGTGGTGGTGATGGGAAACGGATTAAGACATCAGTGGGGAACAGGAATGAGAGCAGTACCACTACTACTACTAAAGGTGAAGCTGCAGAACACAGTTCAGGAAAGCATGCGGAGCAAGTTACNCAGCCACCTTCTGAGCCTCCTAAGCAAGACTACATCCATGTTCGAGCCAGAAGGGGTCAAGCTACTGATAGCCATAGTCTTGCAGAAAGAGCTAGAAGGGAAAAGATCAGTGAAAGGATGAAAATTCTTCAGGANTTAGTCCCTGGTTGCAATAAGGTTATTGGGAAAGCATTGGTCCTTGATGAGATAATCAATTATATCCAATCGCTTCAGCGCCAAGTAGAGTTCTTGTCGATGAAGCTTGAAGCAGTAAATTCAAGACTGACCCCTGGCATTGAAGTGTTTCCTCCTAAAGATTTTGACCAGCAAACATTCGATACAGCCGCCATGCCATTCGCTTCACAAGCTACAAGAGAGTATAGCCGGGGTTCGTCGCCAGATTGGTTACATATGCAGGTGGGAGGCGGTTTTGAAAGAGCGATGTAGTCTATGAAACTTCATCACCTGATAATAAATGCAAATAGGATTTGTAGTCTCTACTTCACAACTTCCATAAATCANATACTCGAGGTGTTAAAGTCCAATGGACACTTCNTTCCCGTTTTCTACACCAGGCATGGAGCTGTTATCTGTTTCCACAAGATCCACTTCGGTTAGTAACTATTTAAGCAAAACTCCATTTGTTTAGTGTGTTGAAAATGAATTCATTTACCCAAGATGTAGCTTAGTGGGACTATAGGCTTTCTATGTTGATACTCTTCATAACCTTTTAAAACGATTATTGTTGTTGTAAAAGAATGCTGCTTTTTCCT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00157	146031	149699	-

Gene family

Gene family	subfamily
Transcription Factors Family	bHLH

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0046983 protein dimerization activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000157s00015833.1	PF00010.21	HLH	158	205	7.80E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.586
SRR1783600	control	16.835
SRR1783602	moderate drought stress	13.188
SRR1811619	moderate drought stress	13.484

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.230
DRR006520	Root Summer glycyrrhizin high producing strain	6.873
DRR006521	Root Winter glycyrrhizin high producing strain	4.077
DRR006522	Root Winter glycyrrhizin high producing strain	4.256
DRR006523	Root Summer glycyrrhizin low producing strain	2.067
DRR006524	Root Summer glycyrrhizin low producing strain	1.838
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.909
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.530

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	15.126
SRR2868004	Drought Stress(Tissue:root)	10.161
SRR2967015	Control (Tissue:root)	11.990

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	9.450
SRR9715740	Leave	6.327
SRR9715741	Leave	4.104
SRR9715739	Root	5.194
SRR9715742	Root	6.149
SRR9715743	Root	4.011

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	33.384
SRR8749028	MeJA induced 9h	14.997
SRR8749029	MeJA induced 9h	24.843
SRR8749030	Uninduced	7.332
SRR8749031	Uninduced	5.418
SRR8749032	Uninduced	6.691

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	14.679
SRR8400027	Control-Root	16.426