Gene detail information of Glyur000157s00015848.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G69910.16.00E-123Protein kinase superfamily protein
NRXP_003613504.10Wall-associated receptor kinase-like protein [Medicago truncatula]
COGYP_008151634.12.00E-23hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|P0C5E2|Y1839_ARATH3.00E-88Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBLtr|G7K8B0|G7K8B0_MEDTR0Tyrosine kinase family protein {ECO:0000313|EMBL:AES96462.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00157255640256632-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0009966  regulation of signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000157s00015848.1PF07714.12Pkinase_Tyr323201.70E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.182
SRR1783600control8.461
SRR1783602moderate drought stress8.906
SRR1811619moderate drought stress8.687

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.175
DRR006520Root Summer glycyrrhizin high producing strain4.020
DRR006521Root Winter glycyrrhizin high producing strain1.010
DRR006522Root Winter glycyrrhizin high producing strain0.986
DRR006523Root Summer glycyrrhizin low producing strain3.977
DRR006524Root Summer glycyrrhizin low producing strain3.462
DRR006525Leaf Summer glycyrrhizin high producing strain8.415
DRR006526Leaf Summer glycyrrhizin high producing strain7.762

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.467
SRR2868004Drought Stress(Tissue:root)4.343
SRR2967015Control (Tissue:root)3.782

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.800
SRR9715740Leave1.974
SRR9715741Leave2.492
SRR9715739Root3.893
SRR9715742Root2.598
SRR9715743Root3.298

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.093
SRR8749028MeJA induced 9h0.234
SRR8749029MeJA induced 9h1.053
SRR8749030Uninduced0.259
SRR8749031Uninduced0.077
SRR8749032Uninduced0.304

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.823
SRR8400027Control-Root1.721

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved