Gene detail information of Glyur000158s00011334.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G48010.13.00E-137receptor-like kinase in in flowers 3
NRXP_004493631.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3-like [Cicer arietinum]
COGYP_001958461.12.00E-14hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|P93050|RKF3_ARATH2.00E-171Probable LRR receptor-like serine/threonine-protein kinase RKF3 (Precursor)
trEMBLtr|A0A072U3F3|A0A072U3F3_MEDTR0LRR receptor-like Serine/Threonine-kinase RKF3, putative {ECO:0000313|EMBL:KEH23688.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001581886528806-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000158s00011334.1PF00069.20Pkinase2934444.10E-31
Glyur000158s00011334.1PF07714.12Pkinase_Tyr6857485.50E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.462
SRR1783600control5.391
SRR1783602moderate drought stress5.347
SRR1811619moderate drought stress5.416

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.563
DRR006520Root Summer glycyrrhizin high producing strain8.146
DRR006521Root Winter glycyrrhizin high producing strain3.273
DRR006522Root Winter glycyrrhizin high producing strain3.094
DRR006523Root Summer glycyrrhizin low producing strain12.126
DRR006524Root Summer glycyrrhizin low producing strain12.803
DRR006525Leaf Summer glycyrrhizin high producing strain5.400
DRR006526Leaf Summer glycyrrhizin high producing strain5.426

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.379
SRR2868004Drought Stress(Tissue:root)27.573
SRR2967015Control (Tissue:root)24.646

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.597
SRR9715740Leave9.318
SRR9715741Leave12.027
SRR9715739Root13.748
SRR9715742Root16.491
SRR9715743Root15.644

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.428
SRR8749028MeJA induced 9h7.874
SRR8749029MeJA induced 9h3.109
SRR8749030Uninduced8.086
SRR8749031Uninduced10.220
SRR8749032Uninduced5.189

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.893
SRR8400027Control-Root15.521

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved