Gene detail information of Glyur000158s00011360.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G48150.11.00E-70glutathione peroxidase 4
NRNP_001238132.17.62E-112uncharacterized protein LOC100306136 [Glycine max]
COGYP_005516832.11.00E-55glutathione peroxidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1]
Swissprottr|Q8L910|GPX4_ARATH5.00E-89Probable glutathione peroxidase 4
trEMBLtr|C6SY48|C6SY48_SOYBN3.00E-112Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00158160645164540+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00432gpx EC:1.11.1.9 Arachidonic acid metabolism map00590
Glutathione metabolismmap00480
Thyroid hormone synthesismap04918


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004602  glutathione peroxidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000158s00011360.1PF00255.14GSHPx121202.00E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control51.266
SRR1783600control51.263
SRR1783602moderate drought stress54.729
SRR1811619moderate drought stress55.501

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain40.622
DRR006520Root Summer glycyrrhizin high producing strain39.816
DRR006521Root Winter glycyrrhizin high producing strain75.114
DRR006522Root Winter glycyrrhizin high producing strain73.676
DRR006523Root Summer glycyrrhizin low producing strain62.717
DRR006524Root Summer glycyrrhizin low producing strain61.565
DRR006525Leaf Summer glycyrrhizin high producing strain35.027
DRR006526Leaf Summer glycyrrhizin high producing strain33.691

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)57.743
SRR2868004Drought Stress(Tissue:root)67.814
SRR2967015Control (Tissue:root)61.143

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.991
SRR9715740Leave60.046
SRR9715741Leave54.992
SRR9715739Root16.846
SRR9715742Root36.946
SRR9715743Root31.494

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.616
SRR8749028MeJA induced 9h19.428
SRR8749029MeJA induced 9h17.156
SRR8749030Uninduced18.960
SRR8749031Uninduced13.497
SRR8749032Uninduced14.396

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root65.171
SRR8400027Control-Root65.597

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved