Gene detail information of Glyur000158s00011375.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09820.1 | 8.00E-66 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | KHN45359.1 | 0 | Transcription factor TT8 [Glycine soja] |
| Swissprot | tr|E3SXU4|BHLHW_PEA | 0 | Basic helix-loop-helix protein A |
| trEMBL | tr|I1N9G7|I1N9G7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G33770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00158 | 254023 | 258011 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000158s00011375.1 | PF14215.1 | bHLH-MYC_N | 11 | 197 | 2.10E-51 |
| Glyur000158s00011375.1 | PF00010.21 | HLH | 441 | 482 | 4.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.205 |
| SRR1783600 | control | 0.184 |
| SRR1783602 | moderate drought stress | 0.165 |
| SRR1811619 | moderate drought stress | 0.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.470 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.465 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.231 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.293 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.288 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.300 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.410 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.401 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.281 |
| SRR2967015 | Control (Tissue:root) | 0.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.122 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.469 |
| SRR9715739 | Root | 0.027 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.323 |
| SRR8749028 | MeJA induced 9h | 0.332 |
| SRR8749029 | MeJA induced 9h | 0.101 |
| SRR8749030 | Uninduced | 0.193 |
| SRR8749031 | Uninduced | 2.327 |
| SRR8749032 | Uninduced | 1.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.120 |
| SRR8400027 | Control-Root | 0.098 |