Gene detail information of Glyur000159s00010238.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01060.1 | 3.00E-58 | myb-like HTH transcriptional regulator family protein |
| NR | XP_004493285.1 | 5.98E-175 | PREDICTED: protein PHR1-LIKE 1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8GUN5|PHL1_ARATH | 2.00E-49 | Protein PHR1-LIKE 1 |
| trEMBL | tr|I1N8J6|I1N8J6_SOYBN | 9.00E-164 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G30220.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00159 | 24176 | 28152 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000159s00010238.1 | PF00249.26 | Myb_DNA-binding | 49 | 100 | 3.30E-16 |
| Glyur000159s00010238.1 | PF14379.1 | Myb_CC_LHEQLE | 134 | 182 | 3.00E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.092 |
| SRR1783600 | control | 9.920 |
| SRR1783602 | moderate drought stress | 10.041 |
| SRR1811619 | moderate drought stress | 9.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.520 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.637 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.715 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.523 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.360 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.667 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.465 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 25.576 |
| SRR2868004 | Drought Stress(Tissue:root) | 33.723 |
| SRR2967015 | Control (Tissue:root) | 34.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 60.391 |
| SRR9715740 | Leave | 32.551 |
| SRR9715741 | Leave | 62.925 |
| SRR9715739 | Root | 11.909 |
| SRR9715742 | Root | 30.803 |
| SRR9715743 | Root | 27.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.441 |
| SRR8749028 | MeJA induced 9h | 20.851 |
| SRR8749029 | MeJA induced 9h | 25.269 |
| SRR8749030 | Uninduced | 29.378 |
| SRR8749031 | Uninduced | 23.625 |
| SRR8749032 | Uninduced | 24.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 22.517 |
| SRR8400027 | Control-Root | 22.341 |