Gene detail information of Glyur000159s00010272.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08810.1 | 1.00E-68 | myb domain protein 60 |
| NR | XP_007161907.1 | 4.08E-148 | hypothetical protein PHAVU_001G107600g [Phaseolus vulgaris] |
| Swissprot | tr|P81392|MYB06_ANTMA | 9.00E-86 | Myb-related protein 306 |
| trEMBL | tr|V7CYB8|V7CYB8_PHAVU | 2.00E-148 | Uncharacterized protein {ECO:0000313|EMBL:ESW33901.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00159 | 205314 | 207372 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000159s00010272.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 3.70E-15 |
| Glyur000159s00010272.1 | PF00249.26 | Myb_DNA-binding | 67 | 112 | 5.50E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.052 |
| SRR1783600 | control | 0.049 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.480 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.195 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.166 |
| SRR2967015 | Control (Tissue:root) | 0.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.503 |
| SRR9715740 | Leave | 10.836 |
| SRR9715741 | Leave | 7.325 |
| SRR9715739 | Root | 0.004 |
| SRR9715742 | Root | 0.026 |
| SRR9715743 | Root | 0.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.121 |
| SRR8749028 | MeJA induced 9h | 0.199 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.086 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.252 |
| SRR8400027 | Control-Root | 1.056 |