Gene detail information of Glyur000159s00010276.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G17770.11.00E-133NADH:cytochrome B5 reductase 1
NRAAV69019.10NADH:cytochrome b5 reductase [Vernicia fordii]
COGYP_003474183.13.00E-23oxidoreductase FAD-binding domain-containing protein [Thermocrinis albus DSM 14484]
Swissprottr|Q9ZNT1|NB5R1_ARATH9.00E-170NADH--cytochrome b5 reductase 1
trEMBLtr|Q5PY86|Q5PY86_VERFO0NADH:cytochrome b5 reductase {ECO:0000313|EMBL:AAV69021.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00159224406230003+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00326E1.6.2.2 EC:1.6.2.2 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000159s00010276.1PF00970.19FAD_binding_6471451.20E-29
Glyur000159s00010276.1PF00175.16NAD_binding_11552613.00E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control101.853
SRR1783600control102.151
SRR1783602moderate drought stress63.076
SRR1811619moderate drought stress62.532

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain88.928
DRR006520Root Summer glycyrrhizin high producing strain88.121
DRR006521Root Winter glycyrrhizin high producing strain48.994
DRR006522Root Winter glycyrrhizin high producing strain47.724
DRR006523Root Summer glycyrrhizin low producing strain102.883
DRR006524Root Summer glycyrrhizin low producing strain102.914
DRR006525Leaf Summer glycyrrhizin high producing strain61.053
DRR006526Leaf Summer glycyrrhizin high producing strain60.758

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)120.674
SRR2868004Drought Stress(Tissue:root)93.912
SRR2967015Control (Tissue:root)77.749

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave73.274
SRR9715740Leave44.513
SRR9715741Leave48.237
SRR9715739Root81.894
SRR9715742Root55.493
SRR9715743Root58.549

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h115.324
SRR8749028MeJA induced 9h114.307
SRR8749029MeJA induced 9h108.647
SRR8749030Uninduced225.022
SRR8749031Uninduced177.204
SRR8749032Uninduced143.153

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root128.158
SRR8400027Control-Root111.495

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved