Gene detail information of Glyur000159s00010285.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69560.1 | 1.00E-57 | myb domain protein 105 |
| NR | XP_003553355.1 | 1.40E-137 | PREDICTED: myb-like protein Q-like [Glycine max] |
| Swissprot | tr|Q9FDW1|MYB44_ARATH | 2.00E-37 | Transcription factor MYB44 |
| trEMBL | tr|I1N8F4|I1N8F4_SOYBN | 5.00E-138 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G29670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00159 | 291971 | 294495 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000159s00010285.1 | PF13921.1 | Myb_DNA-bind_6 | 115 | 175 | 5.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.496 |
| SRR1783600 | control | 21.576 |
| SRR1783602 | moderate drought stress | 15.932 |
| SRR1811619 | moderate drought stress | 16.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.375 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.189 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.623 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.074 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.190 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.079 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.766 |
| SRR2967015 | Control (Tissue:root) | 4.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.639 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.317 |
| SRR9715739 | Root | 3.779 |
| SRR9715742 | Root | 10.707 |
| SRR9715743 | Root | 10.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.985 |
| SRR8749028 | MeJA induced 9h | 2.666 |
| SRR8749029 | MeJA induced 9h | 2.424 |
| SRR8749030 | Uninduced | 0.743 |
| SRR8749031 | Uninduced | 0.186 |
| SRR8749032 | Uninduced | 0.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.974 |
| SRR8400027 | Control-Root | 10.122 |