Gene detail information of Glyur000161s00011294.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61620.1 | 5.00E-32 | phosphoinositide binding |
| NR | XP_004485689.1 | 3.81E-44 | PREDICTED: nitric oxide synthase-interacting protein-like [Cicer arietinum] |
| trEMBL | tr|I3SS86|I3SS86_LOTJA | 4.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:AFK43128.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00161 | 290855 | 291160 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | RING |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.792 |
| SRR1783600 | control | 11.042 |
| SRR1783602 | moderate drought stress | 13.275 |
| SRR1811619 | moderate drought stress | 11.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.636 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.003 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.522 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.334 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.996 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.652 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.683 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.522 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.609 |
| SRR2967015 | Control (Tissue:root) | 12.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.102 |
| SRR9715740 | Leave | 2.259 |
| SRR9715741 | Leave | 0.530 |
| SRR9715739 | Root | 7.811 |
| SRR9715742 | Root | 0.027 |
| SRR9715743 | Root | 0.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.334 |
| SRR8749028 | MeJA induced 9h | 3.171 |
| SRR8749029 | MeJA induced 9h | 2.378 |
| SRR8749030 | Uninduced | 5.657 |
| SRR8749031 | Uninduced | 2.828 |
| SRR8749032 | Uninduced | 2.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.747 |
| SRR8400027 | Control-Root | 1.741 |