Gene detail information of Glyur000162s00009896.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G25180.14.00E-108response regulator 12
NRXP_003526216.10PREDICTED: two-component response regulator ARR12 [Glycine max]
COGYP_003674861.12.00E-16Fis family two component sigma54 specific transcriptional regulator [Methylotenera versatilis 301]
Swissprottr|P62598|ARR12_ARATH2.00E-130Two-component response regulator ARR12
trEMBLtr|I1K8P7|I1K8P7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G06730.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001624626250598+


Gene family

Gene familysubfamily
Transcription Factors FamilyARR-B


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000162s00009896.1PF00072.19Response_reg141226.00E-22
Glyur000162s00009896.1PF00249.26Myb_DNA-binding1972362.00E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.078
SRR1783600control18.309
SRR1783602moderate drought stress14.990
SRR1811619moderate drought stress14.736

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.872
DRR006520Root Summer glycyrrhizin high producing strain12.556
DRR006521Root Winter glycyrrhizin high producing strain0.889
DRR006522Root Winter glycyrrhizin high producing strain0.822
DRR006523Root Summer glycyrrhizin low producing strain9.331
DRR006524Root Summer glycyrrhizin low producing strain9.246
DRR006525Leaf Summer glycyrrhizin high producing strain6.865
DRR006526Leaf Summer glycyrrhizin high producing strain6.828

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.657
SRR2868004Drought Stress(Tissue:root)34.900
SRR2967015Control (Tissue:root)37.248

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.839
SRR9715740Leave8.252
SRR9715741Leave9.891
SRR9715739Root2.085
SRR9715742Root13.177
SRR9715743Root10.578

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.581
SRR8749028MeJA induced 9h17.462
SRR8749029MeJA induced 9h11.608
SRR8749030Uninduced17.697
SRR8749031Uninduced5.439
SRR8749032Uninduced3.653

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.778
SRR8400027Control-Root21.667

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved