Gene detail information of Glyur000162s00009909.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G80840.12.00E-44WRKY DNA-binding protein 40
NRXP_003603300.11.29E-107WRKY transcription factor [Medicago truncatula]
Swissprottr|Q9SAH7|WRK40_ARATH1.00E-62Probable WRKY transcription factor 40
trEMBLtr|G7J9V1|G7J9V1_MEDTR5.00E-108WRKY family transcription factor {ECO:0000313|EMBL:AES73551.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00162154672156644+


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000162s00009909.1PF03106.10WRKY1361943.70E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.472
SRR1783600control0.498
SRR1783602moderate drought stress0.465
SRR1811619moderate drought stress0.452

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.717
DRR006520Root Summer glycyrrhizin high producing strain0.697
DRR006521Root Winter glycyrrhizin high producing strain0.197
DRR006522Root Winter glycyrrhizin high producing strain0.170
DRR006523Root Summer glycyrrhizin low producing strain0.850
DRR006524Root Summer glycyrrhizin low producing strain0.888
DRR006525Leaf Summer glycyrrhizin high producing strain13.541
DRR006526Leaf Summer glycyrrhizin high producing strain12.946

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.365
SRR2868004Drought Stress(Tissue:root)24.918
SRR2967015Control (Tissue:root)10.965

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave57.141
SRR9715740Leave54.406
SRR9715741Leave130.859
SRR9715739Root1.027
SRR9715742Root2.037
SRR9715743Root1.807

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.879
SRR8749028MeJA induced 9h55.771
SRR8749029MeJA induced 9h147.359
SRR8749030Uninduced55.548
SRR8749031Uninduced69.678
SRR8749032Uninduced46.924

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.981
SRR8400027Control-Root2.285

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved