Gene detail information of Glyur000163s00011107.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57620.1 | 5.00E-61 | myb domain protein 36 |
| NR | XP_006604580.1 | 1.04E-148 | PREDICTED: transcription factor RAX2 [Glycine max] |
| Swissprot | tr|Q9M2Y9|RAX3_ARATH | 6.00E-72 | Transcription factor RAX3 |
| trEMBL | tr|I1NAB3|I1NAB3_SOYBN | 4.00E-149 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G36830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00163 | 87036 | 88419 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000163s00011107.1 | PF00249.26 | Myb_DNA-binding | 14 | 62 | 4.10E-15 |
| Glyur000163s00011107.1 | PF00249.26 | Myb_DNA-binding | 69 | 111 | 1.90E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.606 |
| SRR1783600 | control | 3.579 |
| SRR1783602 | moderate drought stress | 6.108 |
| SRR1811619 | moderate drought stress | 6.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.807 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.714 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.226 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.158 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.339 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.289 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 22.334 |
| SRR2868004 | Drought Stress(Tissue:root) | 29.194 |
| SRR2967015 | Control (Tissue:root) | 25.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.894 |
| SRR9715740 | Leave | 2.245 |
| SRR9715741 | Leave | 3.759 |
| SRR9715739 | Root | 0.050 |
| SRR9715742 | Root | 1.314 |
| SRR9715743 | Root | 1.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.304 |
| SRR8749028 | MeJA induced 9h | 10.459 |
| SRR8749029 | MeJA induced 9h | 7.195 |
| SRR8749030 | Uninduced | 25.042 |
| SRR8749031 | Uninduced | 23.530 |
| SRR8749032 | Uninduced | 12.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.465 |
| SRR8400027 | Control-Root | 3.927 |