Gene detail information of Glyur000163s00011123.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03330.2 | 1.00E-82 | Cysteine proteinases superfamily protein |
| NR | XP_004493983.1 | 0 | PREDICTED: uncharacterized protein LOC101498248 isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7CXC7|V7CXC7_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34759.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00163 | 198452 | 203827 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | OTU |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000163s00011123.1 | PF02338.14 | OTU | 201 | 312 | 5.30E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.288 |
| SRR1783600 | control | 12.286 |
| SRR1783602 | moderate drought stress | 13.076 |
| SRR1811619 | moderate drought stress | 12.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.138 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.336 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.166 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.512 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.033 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 44.251 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.065 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.230 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.811 |
| SRR2967015 | Control (Tissue:root) | 11.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 21.193 |
| SRR9715740 | Leave | 20.235 |
| SRR9715741 | Leave | 27.867 |
| SRR9715739 | Root | 13.172 |
| SRR9715742 | Root | 18.601 |
| SRR9715743 | Root | 19.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.003 |
| SRR8749028 | MeJA induced 9h | 30.982 |
| SRR8749029 | MeJA induced 9h | 14.467 |
| SRR8749030 | Uninduced | 36.868 |
| SRR8749031 | Uninduced | 31.160 |
| SRR8749032 | Uninduced | 22.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.245 |
| SRR8400027 | Control-Root | 14.033 |