Gene detail information of Glyur000164s00014473.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15050.1 | 1.00E-20 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| NR | XP_007154997.1 | 2.41E-30 | hypothetical protein PHAVU_003G164200g [Phaseolus vulgaris] |
| trEMBL | tr|V7CDM5|V7CDM5_PHAVU | 9.00E-31 | Uncharacterized protein {ECO:0000313|EMBL:ESW26991.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00164 | 17155 | 20375 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT14 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000164s00014473.1 | PF02485.16 | Branch | 7 | 67 | 1.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.477 |
| SRR1783600 | control | 1.268 |
| SRR1783602 | moderate drought stress | 0.374 |
| SRR1811619 | moderate drought stress | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.196 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.089 |
| SRR2967015 | Control (Tissue:root) | 0.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.065 |
| SRR9715740 | Leave | 0.138 |
| SRR9715741 | Leave | 0.177 |
| SRR9715739 | Root | 0.039 |
| SRR9715742 | Root | 0.059 |
| SRR9715743 | Root | 0.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.320 |
| SRR8749028 | MeJA induced 9h | 0.559 |
| SRR8749029 | MeJA induced 9h | 0.111 |
| SRR8749030 | Uninduced | 0.060 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.359 |
| SRR8400027 | Control-Root | 0.257 |