Gene detail information of Glyur000164s00014502.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G09890.10Protein kinase family protein
NRXP_007160854.10hypothetical protein PHAVU_001G022300g [Phaseolus vulgaris]
COGYP_007203500.14.00E-21serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
Swissprottr|F4J6F6|IREH1_ARATH5.00E-76Probable serine/threonine protein kinase IREH1 {ECO:0000305}
trEMBLtr|V7CTY8|V7CTY8_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW32848.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00164262144270316-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000164s00014502.1PF00069.20Pkinase1094081.50E-61
Glyur000164s00014502.1PF00433.19Pkinase_C4274730.00043


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.979
SRR1783600control25.796
SRR1783602moderate drought stress25.567
SRR1811619moderate drought stress25.240

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.070
DRR006520Root Summer glycyrrhizin high producing strain18.135
DRR006521Root Winter glycyrrhizin high producing strain50.529
DRR006522Root Winter glycyrrhizin high producing strain48.710
DRR006523Root Summer glycyrrhizin low producing strain22.799
DRR006524Root Summer glycyrrhizin low producing strain22.584
DRR006525Leaf Summer glycyrrhizin high producing strain5.276
DRR006526Leaf Summer glycyrrhizin high producing strain5.336

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.240
SRR2868004Drought Stress(Tissue:root)33.872
SRR2967015Control (Tissue:root)39.342

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.741
SRR9715740Leave11.169
SRR9715741Leave16.110
SRR9715739Root2.368
SRR9715742Root16.094
SRR9715743Root12.933

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h57.937
SRR8749028MeJA induced 9h48.873
SRR8749029MeJA induced 9h61.613
SRR8749030Uninduced54.000
SRR8749031Uninduced46.528
SRR8749032Uninduced43.697

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.569
SRR8400027Control-Root27.369

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved