Gene detail information of Glyur000164s00014505.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G45231.24.00E-66S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NRXP_003589174.10Trimethylguanosine synthase [Medicago truncatula]
COGYP_006592878.17.00E-18hypothetical protein BN69_2776 [Methylocystis sp. SC2]
trEMBLtr|G7I3J0|G7I3J0_MEDTR0RNA cap guanine-N2 methyltransferase {ECO:0000313|EMBL:AES59425.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00164276275282794+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14292TGS1 EC:2.1.1.- RNA transport map03013


Gene Ontology

biological_process

GO:0001510  RNA methylation

GO:0009452  7-methylguanosine RNA capping


molecular_function

GO:0005515  protein binding

GO:0008168  methyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000164s00014505.1PF00397.21WW2182451.00E-05
Glyur000164s00014505.1PF09445.5Methyltransf_154615212.20E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.072
SRR1783600control3.139
SRR1783602moderate drought stress3.585
SRR1811619moderate drought stress3.730

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.112
DRR006520Root Summer glycyrrhizin high producing strain3.941
DRR006521Root Winter glycyrrhizin high producing strain7.159
DRR006522Root Winter glycyrrhizin high producing strain7.061
DRR006523Root Summer glycyrrhizin low producing strain5.605
DRR006524Root Summer glycyrrhizin low producing strain5.335
DRR006525Leaf Summer glycyrrhizin high producing strain1.454
DRR006526Leaf Summer glycyrrhizin high producing strain1.389

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.501
SRR2868004Drought Stress(Tissue:root)8.799
SRR2967015Control (Tissue:root)10.896

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.616
SRR9715740Leave3.047
SRR9715741Leave2.572
SRR9715739Root0.892
SRR9715742Root4.105
SRR9715743Root4.697

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.856
SRR8749028MeJA induced 9h35.267
SRR8749029MeJA induced 9h35.927
SRR8749030Uninduced7.815
SRR8749031Uninduced11.426
SRR8749032Uninduced20.224

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.692
SRR8400027Control-Root6.941

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved