Gene detail information of Glyur000165s00008489.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15480.1 | 5.00E-132 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_002518668.1 | 0 | UDP-glucosyltransferase, putative [Ricinus communis] |
| COG | NP_844483.1 | 7.00E-08 | glycosyl transferase [Bacillus anthracis str. Ames] |
| Swissprot | tr|Q9MB73|LGT_CITUN | 0 | Limonoid UDP-glucosyltransferase |
| trEMBL | tr|B9RY84|B9RY84_RICCO | 0 | UDP-glucosyltransferase, putative {ECO:0000313|EMBL:EEF43593.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00165 | 78716 | 80284 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000165s00008489.1 | PF00201.13 | UDPGT | 284 | 406 | 7.60E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.631 |
| SRR1811619 | moderate drought stress | 0.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.414 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.295 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.267 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.324 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.047 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.029 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.191 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.519 |
| SRR2967015 | Control (Tissue:root) | 0.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.158 |
| SRR9715742 | Root | 0.104 |
| SRR9715743 | Root | 0.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.196 |
| SRR8749028 | MeJA induced 9h | 0.311 |
| SRR8749029 | MeJA induced 9h | 0.299 |
| SRR8749030 | Uninduced | 0.852 |
| SRR8749031 | Uninduced | 0.220 |
| SRR8749032 | Uninduced | 0.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.063 |
| SRR8400027 | Control-Root | 0.078 |