Gene detail information of Glyur000165s00008504.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G56460.12.00E-41Protein kinase superfamily protein
NRAET04401.21.82E-75receptor Serine/Threonine kinase [Medicago truncatula]
Swissprottr|Q9FM85|Y5564_ARATH4.00E-57Probable receptor-like protein kinase At5g56460
trEMBLtr|G7L844|G7L844_MEDTR7.00E-76Receptor Serine/Threonine kinase {ECO:0000313|EMBL:AET04401.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00165166474167452-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000165s00008504.1PF07714.12Pkinase_Tyr291251.70E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.364
SRR1783600control0.408
SRR1783602moderate drought stress0.760
SRR1811619moderate drought stress0.545

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.249
DRR006520Root Summer glycyrrhizin high producing strain3.685
DRR006521Root Winter glycyrrhizin high producing strain0.222
DRR006522Root Winter glycyrrhizin high producing strain0.225
DRR006523Root Summer glycyrrhizin low producing strain1.961
DRR006524Root Summer glycyrrhizin low producing strain1.954
DRR006525Leaf Summer glycyrrhizin high producing strain0.699
DRR006526Leaf Summer glycyrrhizin high producing strain0.867

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.337
SRR2868004Drought Stress(Tissue:root)2.887
SRR2967015Control (Tissue:root)2.737

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.211
SRR9715740Leave0.205
SRR9715741Leave0.200
SRR9715739Root0.347
SRR9715742Root0.714
SRR9715743Root0.518

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.424
SRR8749028MeJA induced 9h1.152
SRR8749029MeJA induced 9h2.484
SRR8749030Uninduced0.197
SRR8749031Uninduced0.222
SRR8749032Uninduced1.244

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.143
SRR8400027Control-Root0.904

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved