Gene detail information of Glyur000165s00008522.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G06925.14.00E-49Phospholipase A2 family protein
NRNP_001241376.12.87E-87uncharacterized protein LOC100797904 precursor [Glycine max]
Swissprottr|Q8S8N6|PLA2A_ARATH7.00E-74Phospholipase A2-alpha (Precursor)
trEMBLtr|C6TCD8|C6TCD8_SOYBN1.00E-87Putative uncharacterized protein {ECO:0000313|EMBL:ACU19490.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00165230812232623-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01047PLA2G, SPLA2 EC:3.1.1.4 Glycerophospholipid metabolism map00564
Ether lipid metabolismmap00565
Arachidonic acid metabolismmap00590
Linoleic acid metabolismmap00591
alpha-Linolenic acid metabolismmap00592
Ras signaling pathwaymap04014
Vascular smooth muscle contractionmap04270
Pancreatic secretionmap04972
Fat digestion and absorptionmap04975


Gene Ontology

biological_process

GO:0006644  phospholipid metabolic process

GO:0016042  lipid catabolic process


molecular_function

GO:0004623  phospholipase A2 activity

GO:0005509  calcium ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.408
SRR1783600control12.156
SRR1783602moderate drought stress6.599
SRR1811619moderate drought stress6.454

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.284
DRR006520Root Summer glycyrrhizin high producing strain9.341
DRR006521Root Winter glycyrrhizin high producing strain0.883
DRR006522Root Winter glycyrrhizin high producing strain1.243
DRR006523Root Summer glycyrrhizin low producing strain9.276
DRR006524Root Summer glycyrrhizin low producing strain8.792
DRR006525Leaf Summer glycyrrhizin high producing strain2.904
DRR006526Leaf Summer glycyrrhizin high producing strain2.964

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.601
SRR2868004Drought Stress(Tissue:root)0.928
SRR2967015Control (Tissue:root)1.494

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.314
SRR9715740Leave0.000
SRR9715741Leave0.000
SRR9715739Root0.331
SRR9715742Root0.333
SRR9715743Root0.366

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.316
SRR8749028MeJA induced 9h0.379
SRR8749029MeJA induced 9h0.129
SRR8749030Uninduced0.155
SRR8749031Uninduced0.348
SRR8749032Uninduced0.478

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.124
SRR8400027Control-Root4.917

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved