Gene detail information of Glyur000165s00008523.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10700.11.00E-146galacturonic acid kinase
NRXP_003630627.10Galactokinase [Medicago truncatula]
COGYP_003574846.12.00E-70galactokinase [Prevotella ruminicola 23]
Swissprottr|Q8VYG2|GALAK_ARATH0Galacturonokinase
trEMBLtr|G7LJJ0|G7LJJ0_MEDTR0Galactokinase {ECO:0000313|EMBL:AET05103.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00165233580243581-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18677GALAK EC:2.7.1.44 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

biological_process

GO:0008152  metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0005524  ATP binding

GO:0016301  kinase activity

GO:0016773  phosphotransferase activity, alcohol group as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000165s00008523.1PF10509.4GalKase_gal_bdg17545.10E-05
Glyur000165s00008523.1PF08544.8GHMP_kinases_C3023766.70E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.131
SRR1783600control16.264
SRR1783602moderate drought stress5.986
SRR1811619moderate drought stress6.142

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.917
DRR006520Root Summer glycyrrhizin high producing strain12.441
DRR006521Root Winter glycyrrhizin high producing strain13.293
DRR006522Root Winter glycyrrhizin high producing strain12.476
DRR006523Root Summer glycyrrhizin low producing strain11.971
DRR006524Root Summer glycyrrhizin low producing strain12.121
DRR006525Leaf Summer glycyrrhizin high producing strain8.912
DRR006526Leaf Summer glycyrrhizin high producing strain8.282

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.305
SRR2868004Drought Stress(Tissue:root)18.772
SRR2967015Control (Tissue:root)14.397

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.069
SRR9715740Leave3.812
SRR9715741Leave3.354
SRR9715739Root1.099
SRR9715742Root4.333
SRR9715743Root3.113

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.495
SRR8749028MeJA induced 9h45.523
SRR8749029MeJA induced 9h40.193
SRR8749030Uninduced7.950
SRR8749031Uninduced4.610
SRR8749032Uninduced8.193

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.822
SRR8400027Control-Root15.873

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved