Gene detail information of Glyur000166s00010573.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05805.14.00E-49basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NRXP_007142611.11.02E-112hypothetical protein PHAVU_007G002200g [Phaseolus vulgaris]
Swissprottr|Q8H102|BH128_ARATH2.00E-63Transcription factor bHLH128
trEMBLtr|V7BAJ5|V7BAJ5_PHAVU4.00E-113Uncharacterized protein {ECO:0000313|EMBL:ESW14605.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001668883792773-


Gene family

Gene familysubfamily
Transcription Factors FamilybHLH


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0046983  protein dimerization activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000166s00010573.2PF00010.21HLH3524289.50E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.987
SRR1783600control19.021
SRR1783602moderate drought stress16.351
SRR1811619moderate drought stress16.622

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.034
DRR006520Root Summer glycyrrhizin high producing strain15.882
DRR006521Root Winter glycyrrhizin high producing strain15.543
DRR006522Root Winter glycyrrhizin high producing strain14.688
DRR006523Root Summer glycyrrhizin low producing strain21.189
DRR006524Root Summer glycyrrhizin low producing strain21.273
DRR006525Leaf Summer glycyrrhizin high producing strain4.855
DRR006526Leaf Summer glycyrrhizin high producing strain4.039

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.438
SRR2868004Drought Stress(Tissue:root)71.767
SRR2967015Control (Tissue:root)68.631

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.390
SRR9715740Leave2.960
SRR9715741Leave11.417
SRR9715739Root25.802
SRR9715742Root16.141
SRR9715743Root18.886

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h48.274
SRR8749028MeJA induced 9h96.465
SRR8749029MeJA induced 9h57.997
SRR8749030Uninduced105.740
SRR8749031Uninduced113.965
SRR8749032Uninduced122.747

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.558
SRR8400027Control-Root50.308

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved