Gene detail information of Glyur000166s00010585.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G26570.10catalytics;carbohydrate kinases;phosphoglucan, water dikinases
NRXP_004497422.10PREDICTED: phosphoglucan, water dikinase, chloroplastic-like isoform X2 [Cicer arietinum]
COGNP_845441.12.00E-22phosphoenolpyruvate synthase [Bacillus anthracis str. Ames]
Swissprottr|Q6ZY51|PWD_ARATH0Phosphoglucan, water dikinase, chloroplastic (Precursor)
trEMBLtr|A0A072UBU6|A0A072UBU6_MEDTR0Phosphoglucan, water dikinase {ECO:0000313|EMBL:KEH27294.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00166171580183926-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0016310  phosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0005524  ATP binding

GO:0016301  kinase activity

GO:0030246  carbohydrate binding

GO:2001070  starch binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000166s00010585.1PF00686.14CBM_20851696.40E-18
Glyur000166s00010585.1PF01326.14PPDK_N84611654.50E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control60.414
SRR1783600control60.660
SRR1783602moderate drought stress45.516
SRR1811619moderate drought stress45.322

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain40.790
DRR006520Root Summer glycyrrhizin high producing strain40.329
DRR006521Root Winter glycyrrhizin high producing strain26.353
DRR006522Root Winter glycyrrhizin high producing strain25.387
DRR006523Root Summer glycyrrhizin low producing strain26.729
DRR006524Root Summer glycyrrhizin low producing strain26.942
DRR006525Leaf Summer glycyrrhizin high producing strain93.818
DRR006526Leaf Summer glycyrrhizin high producing strain93.162

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.142
SRR2868004Drought Stress(Tissue:root)34.858
SRR2967015Control (Tissue:root)31.502

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave64.506
SRR9715740Leave80.379
SRR9715741Leave63.545
SRR9715739Root11.791
SRR9715742Root50.286
SRR9715743Root42.155

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.715
SRR8749028MeJA induced 9h18.253
SRR8749029MeJA induced 9h7.432
SRR8749030Uninduced8.821
SRR8749031Uninduced6.055
SRR8749032Uninduced5.207

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root80.574
SRR8400027Control-Root84.166

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved