Gene detail information of Glyur000166s00010596.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G43280.13.00E-103delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1
NRAFK36657.17.79E-169unknown [Medicago truncatula]
COGYP_004657791.15.00E-85enoyl-CoA hydratase [Runella slithyformis DSM 19594]
Swissprottr|Q8GYN9|MENB_ARATH5.00E-191,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal
trEMBLtr|G7JC24|G7JC24_MEDTR3.00E-169Uncharacterized protein {ECO:0000313|EMBL:AFK36657.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00166216325218043-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12663ECH1 EC:5.3.3.- Peroxisome map04146


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000166s00010596.1PF00378.15ECH162383.40E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.382
SRR1783600control16.546
SRR1783602moderate drought stress14.642
SRR1811619moderate drought stress14.627

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.926
DRR006520Root Summer glycyrrhizin high producing strain17.880
DRR006521Root Winter glycyrrhizin high producing strain15.114
DRR006522Root Winter glycyrrhizin high producing strain15.030
DRR006523Root Summer glycyrrhizin low producing strain15.421
DRR006524Root Summer glycyrrhizin low producing strain15.556
DRR006525Leaf Summer glycyrrhizin high producing strain13.712
DRR006526Leaf Summer glycyrrhizin high producing strain13.636

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.729
SRR2868004Drought Stress(Tissue:root)21.903
SRR2967015Control (Tissue:root)18.797

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.799
SRR9715740Leave23.696
SRR9715741Leave24.006
SRR9715739Root17.424
SRR9715742Root20.191
SRR9715743Root17.775

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.121
SRR8749028MeJA induced 9h12.252
SRR8749029MeJA induced 9h10.313
SRR8749030Uninduced19.068
SRR8749031Uninduced12.063
SRR8749032Uninduced16.354

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.638
SRR8400027Control-Root21.597

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved