Gene detail information of Glyur000167s00012280.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G27060.11.00E-164Ferritin/ribonucleotide reductase-like family protein
NRXP_007162902.10hypothetical protein PHAVU_001G190100g [Phaseolus vulgaris]
COGYP_003090974.12.00E-175ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM 2366]
Swissprottr|P49730|RIR2_TOBAC0Ribonucleoside-diphosphate reductase small chain
trEMBLtr|V7D141|V7D141_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW34896.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00167186427187416-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10808RRM2 EC:1.17.4.1 Purine metabolism map00230
Pyrimidine metabolismmap00240
Glutathione metabolismmap00480
p53 signaling pathwaymap04115


Gene Ontology

biological_process

GO:0009186  deoxyribonucleoside diphosphate metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000167s00012280.1PF00268.16Ribonuc_red_sm82876.60E-118


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.473
SRR1783600control25.668
SRR1783602moderate drought stress9.890
SRR1811619moderate drought stress10.198

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.786
DRR006520Root Summer glycyrrhizin high producing strain21.666
DRR006521Root Winter glycyrrhizin high producing strain0.624
DRR006522Root Winter glycyrrhizin high producing strain0.660
DRR006523Root Summer glycyrrhizin low producing strain9.403
DRR006524Root Summer glycyrrhizin low producing strain10.938
DRR006525Leaf Summer glycyrrhizin high producing strain8.365
DRR006526Leaf Summer glycyrrhizin high producing strain8.577

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)77.923
SRR2868004Drought Stress(Tissue:root)33.484
SRR2967015Control (Tissue:root)38.542

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.173
SRR9715740Leave1.160
SRR9715741Leave4.612
SRR9715739Root34.810
SRR9715742Root13.838
SRR9715743Root16.145

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h206.915
SRR8749028MeJA induced 9h117.528
SRR8749029MeJA induced 9h78.275
SRR8749030Uninduced7.572
SRR8749031Uninduced1.679
SRR8749032Uninduced2.933

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root49.650
SRR8400027Control-Root41.620

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved