Gene detail information of Glyur000169s00018360.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47390.1 | 3.00E-107 | myb-like transcription factor family protein |
| NR | XP_004508939.1 | 0 | PREDICTED: transcription factor MYB1R1-like [Cicer arietinum] |
| Swissprot | tr|Q2V9B0|MY1R1_SOLTU | 1.00E-35 | Transcription factor MYB1R1 |
| trEMBL | tr|T2DNE9|T2DNE9_PHAVU | 0 | MYB transcription factor {ECO:0000313|EMBL:AGV54357.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00169 | 96570 | 100018 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000169s00018360.1 | PF00249.26 | Myb_DNA-binding | 99 | 143 | 1.50E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 127.817 |
| SRR1783600 | control | 128.058 |
| SRR1783602 | moderate drought stress | 244.142 |
| SRR1811619 | moderate drought stress | 242.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 104.237 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 103.191 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 95.868 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 92.336 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 163.716 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 164.465 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 65.843 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 65.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 95.299 |
| SRR2868004 | Drought Stress(Tissue:root) | 134.660 |
| SRR2967015 | Control (Tissue:root) | 211.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 82.573 |
| SRR9715740 | Leave | 85.723 |
| SRR9715741 | Leave | 124.185 |
| SRR9715739 | Root | 99.372 |
| SRR9715742 | Root | 115.818 |
| SRR9715743 | Root | 113.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 88.679 |
| SRR8749028 | MeJA induced 9h | 75.025 |
| SRR8749029 | MeJA induced 9h | 75.380 |
| SRR8749030 | Uninduced | 99.266 |
| SRR8749031 | Uninduced | 132.891 |
| SRR8749032 | Uninduced | 121.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 84.383 |
| SRR8400027 | Control-Root | 81.878 |