Gene detail information of Glyur000169s00018365.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47340.10glutamine-dependent asparagine synthase 1
NRABU95104.10asparagine synthetase [Phaseolus vulgaris]
COGYP_006724377.10Asparagine synthase (glutamine-hydrolyzing) [Riemerella anatipestifer RA-CH-1]
Swissprottr|P49092|ASNS1_LOTJA0Asparagine synthetase [glutamine-hydrolyzing] 1
trEMBLtr|A9XS73|A9XS73_PHAVU0Asparagine synthetase {ECO:0000256|PIRNR:PIRNR001589}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00169150741158218+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01953asnB, ASNS EC:6.3.5.4 Alanine, aspartate and glutamate metabolism map00250


Gene Ontology

biological_process

GO:0006529  asparagine biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0004066  asparagine synthase (glutamine-hydrolyzing) activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000169s00018365.1PF13537.1GATase_7481651.50E-37
Glyur000169s00018365.1PF00733.16Asn_synthase2104171.10E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control109.040
SRR1783600control108.597
SRR1783602moderate drought stress109.942
SRR1811619moderate drought stress109.039

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain280.546
DRR006520Root Summer glycyrrhizin high producing strain279.081
DRR006521Root Winter glycyrrhizin high producing strain14.239
DRR006522Root Winter glycyrrhizin high producing strain14.163
DRR006523Root Summer glycyrrhizin low producing strain360.660
DRR006524Root Summer glycyrrhizin low producing strain355.663
DRR006525Leaf Summer glycyrrhizin high producing strain20.429
DRR006526Leaf Summer glycyrrhizin high producing strain20.427

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)479.385
SRR2868004Drought Stress(Tissue:root)436.669
SRR2967015Control (Tissue:root)461.961

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.633
SRR9715740Leave3.570
SRR9715741Leave4.604
SRR9715739Root246.436
SRR9715742Root147.101
SRR9715743Root164.249

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.954
SRR8749028MeJA induced 9h56.960
SRR8749029MeJA induced 9h12.290
SRR8749030Uninduced26.529
SRR8749031Uninduced14.942
SRR8749032Uninduced14.403

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root236.229
SRR8400027Control-Root241.766

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved