Gene detail information of Glyur000170s00010994.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06580.10FAD-linked oxidases family protein
NRXP_003521508.10PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial-like isoform X1 [Glycine max]
COGYP_557074.15.00E-158FAD-binding oxidase [Burkholderia xenovorans LB400]
Swissprottr|Q94AX4|DLD_ARATH0D-lactate dehydrogenase [cytochrome], mitochondrial (Precursor)
trEMBLtr|I1JQD0|I1JQD0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G36390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001704176950512+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00102dld, LDHD EC:1.1.2.4 Pyruvate metabolism map00620


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0008762  UDP-N-acetylmuramate dehydrogenase activity

GO:0016491  oxidoreductase activity

GO:0016614  oxidoreductase activity, acting on CH-OH group of donors

GO:0050660  flavin adenine dinucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000170s00010994.1PF01565.18FAD_binding_41472835.90E-38
Glyur000170s00010994.1PF02913.14FAD-oxidase_C3205616.70E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.435
SRR1783600control23.522
SRR1783602moderate drought stress34.427
SRR1811619moderate drought stress34.045

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.230
DRR006520Root Summer glycyrrhizin high producing strain19.892
DRR006521Root Winter glycyrrhizin high producing strain9.988
DRR006522Root Winter glycyrrhizin high producing strain9.773
DRR006523Root Summer glycyrrhizin low producing strain17.889
DRR006524Root Summer glycyrrhizin low producing strain17.730
DRR006525Leaf Summer glycyrrhizin high producing strain19.835
DRR006526Leaf Summer glycyrrhizin high producing strain19.430

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.374
SRR2868004Drought Stress(Tissue:root)27.306
SRR2967015Control (Tissue:root)25.056

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.432
SRR9715740Leave18.963
SRR9715741Leave16.601
SRR9715739Root6.496
SRR9715742Root13.133
SRR9715743Root11.414

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.066
SRR8749028MeJA induced 9h15.537
SRR8749029MeJA induced 9h17.190
SRR8749030Uninduced37.188
SRR8749031Uninduced30.117
SRR8749032Uninduced23.527

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.527
SRR8400027Control-Root14.979

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved