Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000171s00016620.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G13460.2	0	SU(VAR)3-9 homolog 9
NR	XP_004498209.1	0	PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like isoform X1 [Cicer arietinum]
COG	NP_295256.1	4.00E-25	hypothetical protein DR_1533 [Deinococcus radiodurans R1]
Swissprot	tr\|Q9T0G7\|SUVH9_ARATH	0	Histone-lysine N-methyltransferase family member SUVH9
trEMBL	tr\|K7N0L2\|K7N0L2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G00810.2}

Sequence

Transcript Sequence

>Glyur000171s00016620.1
ATGGATTCTCTCGTGTCTTCTGAAAGCCCCAAGCCCAGCTTCCCTTCCGCACCACCCGGAATCCCAACCCCAATACTAACACCCAAGCTCGAACCCTTGGACGAATGGGTGGGACCCACCCAGGATCCGAACCGACCCGTTTATCCGAACCTCAACCTCAACCTCAGCCTCCTCTGCGACGAAGCCCTCGACGATAATAACAACGTCAACAACAACAACATCAACGACGACGTGTACTCCGAGTTCAACCGAGTCTCCGAGTTATTCCGAGCCACGTTGTTCAACGGCCTCCAGCAGCAATGCCAAAACGACGCCGTTCCGGACCCGAATTCCCGCGCCATCGTTCCGGTCCCCGAAAACAACGGCCACAGCGCCCCCGAGGCAGTCGGGGCGCCGGGAGCGGTCGCCACGACGCCGCGGAGGCGGTGGAAGGAGCTGGTGAGGATGACGGATCACGGCGGCGCGACGGAGCAGCGGCACTTCCGCGACGTGGTTCGGAGGACGAGGATGGTGTACAATTCGCTCCGCGTGCTTGCAGCGAAGGAGGAAGAGAGAAAAGGTGATGTTCGAAGGGTGAGAAGCGATTTGAGGGCTTCAGGGTTGATGAGGAATTGCGGGTTGTGGCTGAACCAAGACAAGAGGATCGTTGGTGCAATCCCTGGGATTCTAATCGGTGATGTTTTCCTCTATAGGATGGAATTGTGTGTGGTTGGGTTGCACGGTCAACCACAGGCTGGGATTGATTACCTACCTGCTAGCATGAGTTCAAATGGGGAACCAATTGCCACAAGTGTTATAGTCTCTGGTGGGTACGAGGATGACGTGGATGAAGGTGATGTCATCATTTACTCTGGCCATGGTGGACAGGACAAGCATTCAAGGCAGGTTTTTCATCAGAAGTTGGAAGGAGGGAACCTTGCTATGGAGAGGAGCATGCACTATGGGATTGAGGTGAGGGTGATTCGAGGTGTTCGGTGCGAGGGCACCGCTGCTGCTTCTGGTAAGGTTTATGTTTATGATGGCCTTTATAGGATTCTTGAGTGTTGGTTTGATGTGGGGAAGTCTGGTTTTGGTGTTTATAAGTATAAGCTTTGGAGGATTGATGGACAGCCTAAGATGGGTAGTGTGGTTCTTAGGGAGGCTGTTATGCTTAGGAGAGATCCCTTGTGTTTTAAACCCATGTGCGTCATGTCGCTTGATGTTTCCGGCGGGAAGGAGAGTGTNGCCGTGAGGCTTTTTAATGACATTGATGGGAACCATGACCCTCTGTGTTACGAGTATCTGCCGAGGACTAATTTCCCGCAGTTTGTGTTTCATCAGAGCGGGGGTGCTACCGGTTGTGACTGTGTGGACGGTTGTGTGGACAGGTGCTTTTGTGCCTTGAAGAATGGAGGTGAGTTTCCTTATAGTCAAAGTGGTGTTCTCTTGAGAGGGAAGCCTTTGATTTTTGAATGTGGCCCTTTTTGCCATTGTCCGCCTCATTGTCGGAACCGTGTCACACAAAAGGGGCTTAGAAACAGGTTGGAGGTGTTTAGATCTAGGCAGACTGGTTGGGGAGTTAGGTCCTTGGACCTTATTCAAGCTGGTGCTTTTATCTGCGAGTACACGGGGGTTGTTCTGACCAGGGAGCAAGCGCAGATCTTGACAATGAATGGCGATTCATTGGTATATCCGGATCGGTTTACGGATAGGTGGCCNGAATGGGGGGATTTATCTATGATAGATGCCAATTATGTGCGTCCATCATACCCATCAATTCCTCCTTTGGATTTTGCCATGGATGTGTCAAGAATGAGGAATGTTGCTTGCTATATGAGTCATAGTTCTACTCCCAATGTGTTGGTTCAGTTCGTTCTGTATGATCACAACAATTTGATGTTCCCTCACCTTATGCTATTTGCAATGGAAAACATCCCTCCAATGAGAGAGCTCAGCCTTGATTATGGGGTAGCTGATGAGTGCACAGGCAAGCTCTCTATATTATTAAAGAGTATTGGTATCAAATACATATCCGATGCTGGTGCAAGAAGGGGATGCAAGTATAGACGCATCATAGATGTAAGTTTGGTAGGGTATAAAATGGAGGGGAGGATGCCAGCTTTGGACTTTTGGCACATAGCCTCCTCCAAACTTTCATTTTTGGCAGTTGTTCCTTTTGGAATTCCAAAAAAAGAATGGGGCAACAGGGATCCAAATCTAGACTACATGGAGACTTTGATAATATATCGTGAATTAACTAATTTCCAAAATATTCAAATTAATTAATGCAGCATAACTCTCATAAGGTTTCAACCTCACCAATTTACAAGGAACAGCAGAATCGGTTGCCATATGACTCTGTCAGGGTATAAAATATGTCAATGTGATATCTAGTATATATGTTGTGCTGACTTTATCTAACACTCGTTGGCAAGTACATGGTACCTCTCTGTGGTGACTGGTGAGGAAGATCAGGAAATGAAGTTCTCTGTCTGCTTGATCTTGAACACTTTTTTTGTATTTTTCTCTTGTCGATGTCATTTATTTGTTTCTTTATACCTTATCTTGGGCGAAGCGTTTTCATGTCTTATCACATTTTTTAAGCTCAAGTAGCGTAGCTGTATTAACACCCCTCCTTTTCATCTTTTGGGGTACTTGTATACCATGTAAGTTCAAAGCTTGTATAGGGATGATATTAGTGGTTGAAATGATAGATGGATAGCATGCAGCTTTTAAAAGTTGGTTTAGATTAGGCATGTGGTTATCCAGAGGACTAGAGTCCAGGGAATAACCAATGATAC

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00171	181666	191828	-

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K11420	EHMT	EC:2.1.1.43	Lysine degradation	map00310
K11420	EHMT	EC:2.1.1.43	Longevity regulating pathway - mammal	map04211

Gene Ontology

biological_process

GO:0016571 histone methylation

GO:0034968 histone lysine methylation

cellular_component GO:0005634 nucleus molecular_function GO:0005515 protein binding GO:0008270 zinc ion binding GO:0018024 histone-lysine N-methyltransferase activity GO:0042393 histone binding "

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000171s00016620.1	PF02182.12	SAD_SRA	214	370	1.70E-55
Glyur000171s00016620.1	PF05033.11	Pre-SET	401	498	8.30E-16
Glyur000171s00016620.1	PF00856.23	SET	517	649	5.10E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.372
SRR1783600	control	4.367
SRR1783602	moderate drought stress	5.831
SRR1811619	moderate drought stress	5.723

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.585
DRR006520	Root Summer glycyrrhizin high producing strain	6.528
DRR006521	Root Winter glycyrrhizin high producing strain	6.539
DRR006522	Root Winter glycyrrhizin high producing strain	6.362
DRR006523	Root Summer glycyrrhizin low producing strain	6.139
DRR006524	Root Summer glycyrrhizin low producing strain	5.665
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.084
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.064

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	7.875
SRR2868004	Drought Stress(Tissue:root)	8.462
SRR2967015	Control (Tissue:root)	9.053

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	6.074
SRR9715740	Leave	6.282
SRR9715741	Leave	6.491
SRR9715739	Root	8.753
SRR9715742	Root	7.815
SRR9715743	Root	9.944

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.211
SRR8749028	MeJA induced 9h	7.404
SRR8749029	MeJA induced 9h	5.168
SRR8749030	Uninduced	4.525
SRR8749031	Uninduced	5.815
SRR8749032	Uninduced	3.887

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	7.406
SRR8400027	Control-Root	8.185