Gene detail information of Glyur000171s00016622.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G13460.20SU(VAR)3-9 homolog 9
NRXP_004498209.10PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like isoform X1 [Cicer arietinum]
COGNP_295256.12.00E-25hypothetical protein DR_1533 [Deinococcus radiodurans R1]
Swissprottr|Q9T0G7|SUVH9_ARATH0Histone-lysine N-methyltransferase family member SUVH9
trEMBLtr|K7N0L2|K7N0L2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G00810.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00171197541199527-


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11420EHMT EC:2.1.1.43 Lysine degradation map00310
Longevity regulating pathway - mammalmap04211


Gene Ontology

biological_process

GO:0016571  histone methylation

GO:0034968  histone lysine methylation


cellular_component

GO:0005634  nucleus


molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding

GO:0018024  histone-lysine N-methyltransferase activity

GO:0042393  histone binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000171s00016622.1PF02182.12SAD_SRA2143701.30E-55
Glyur000171s00016622.1PF05033.11Pre-SET4024883.30E-08
Glyur000171s00016622.1PF00856.23SET5076394.10E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.869
SRR1783600control3.927
SRR1783602moderate drought stress5.097
SRR1811619moderate drought stress4.894

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.124
DRR006520Root Summer glycyrrhizin high producing strain6.159
DRR006521Root Winter glycyrrhizin high producing strain5.255
DRR006522Root Winter glycyrrhizin high producing strain5.344
DRR006523Root Summer glycyrrhizin low producing strain4.955
DRR006524Root Summer glycyrrhizin low producing strain4.907
DRR006525Leaf Summer glycyrrhizin high producing strain3.752
DRR006526Leaf Summer glycyrrhizin high producing strain3.881

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.278
SRR2868004Drought Stress(Tissue:root)5.703
SRR2967015Control (Tissue:root)6.258

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.953
SRR9715740Leave4.165
SRR9715741Leave3.408
SRR9715739Root7.336
SRR9715742Root5.687
SRR9715743Root6.432

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.348
SRR8749028MeJA induced 9h5.279
SRR8749029MeJA induced 9h2.351
SRR8749030Uninduced2.333
SRR8749031Uninduced3.469
SRR8749032Uninduced1.839

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.287
SRR8400027Control-Root5.757

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved