Gene detail information of Glyur000172s00014871.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01540.20Protein kinase superfamily protein
NRXP_003622458.10hypothetical protein MTR_7g037990 [Medicago truncatula]
COGYP_007201433.12.00E-25protein kinase family protein [Singulisphaera acidiphila DSM 18658]
Swissprottr|Q3EDL4|Y1154_ARATH0Probable serine/threonine-protein kinase At1g01540
trEMBLtr|A0A072TNP0|A0A072TNP0_MEDTR0Serine/Threonine-kinase plant-like protein, putative {ECO:0000313|EMBL:KEH18811.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0017216034916-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000172s00014871.1PF00069.20Pkinase1594241.70E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.608
SRR1783600control7.801
SRR1783602moderate drought stress12.466
SRR1811619moderate drought stress12.577

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.456
DRR006520Root Summer glycyrrhizin high producing strain5.501
DRR006521Root Winter glycyrrhizin high producing strain2.495
DRR006522Root Winter glycyrrhizin high producing strain2.360
DRR006523Root Summer glycyrrhizin low producing strain9.376
DRR006524Root Summer glycyrrhizin low producing strain8.641
DRR006525Leaf Summer glycyrrhizin high producing strain1.626
DRR006526Leaf Summer glycyrrhizin high producing strain1.623

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.617
SRR2868004Drought Stress(Tissue:root)19.443
SRR2967015Control (Tissue:root)22.987

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.316
SRR9715740Leave3.050
SRR9715741Leave5.782
SRR9715739Root8.265
SRR9715742Root12.049
SRR9715743Root11.368

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.885
SRR8749028MeJA induced 9h5.520
SRR8749029MeJA induced 9h5.273
SRR8749030Uninduced1.429
SRR8749031Uninduced0.259
SRR8749032Uninduced0.798

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.464
SRR8400027Control-Root18.593

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved