Gene detail information of Glyur000172s00014880.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G01250.14.00E-57WRKY family transcription factor
NRXP_003548638.11.19E-125PREDICTED: WRKY transcription factor 22 [Glycine max]
Swissprottr|O04609|WRK22_ARATH1.00E-77WRKY transcription factor 22
trEMBLtr|I1MKR8|I1MKR8_SOYBN4.00E-126Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G03570.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001726173463591+


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000172s00014880.1PF03106.10WRKY2232811.70E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.012
SRR1783600control0.977
SRR1783602moderate drought stress0.896
SRR1811619moderate drought stress0.859

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.103
DRR006520Root Summer glycyrrhizin high producing strain5.005
DRR006521Root Winter glycyrrhizin high producing strain8.868
DRR006522Root Winter glycyrrhizin high producing strain8.408
DRR006523Root Summer glycyrrhizin low producing strain2.044
DRR006524Root Summer glycyrrhizin low producing strain2.193
DRR006525Leaf Summer glycyrrhizin high producing strain0.314
DRR006526Leaf Summer glycyrrhizin high producing strain0.376

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.343
SRR2868004Drought Stress(Tissue:root)24.437
SRR2967015Control (Tissue:root)53.347

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.903
SRR9715740Leave1.116
SRR9715741Leave0.956
SRR9715739Root2.076
SRR9715742Root8.471
SRR9715743Root6.643

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.882
SRR8749028MeJA induced 9h68.904
SRR8749029MeJA induced 9h16.343
SRR8749030Uninduced11.351
SRR8749031Uninduced12.121
SRR8749032Uninduced6.852

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.270
SRR8400027Control-Root8.741

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved