Gene detail information of Glyur000172s00014909.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61600.2 | 0 | POZ/BTB containin G-protein 1 |
| NR | XP_004510713.1 | 0 | PREDICTED: BTB/POZ domain-containing protein POB1-like [Cicer arietinum] |
| Swissprot | tr|Q9FPW6|POB1_ARATH | 0 | BTB/POZ domain-containing protein POB1 |
| trEMBL | tr|V7ANN5|V7ANN5_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW07179.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00172 | 227588 | 231282 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | BTB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000172s00014909.2 | PF00651.26 | BTB | 147 | 239 | 3.20E-13 |
| Glyur000172s00014909.2 | PF07707.10 | BACK | 274 | 346 | 1.50E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.353 |
| SRR1783600 | control | 31.694 |
| SRR1783602 | moderate drought stress | 32.965 |
| SRR1811619 | moderate drought stress | 33.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.884 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.577 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.281 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.576 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.548 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.421 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.763 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 50.640 |
| SRR2868004 | Drought Stress(Tissue:root) | 49.588 |
| SRR2967015 | Control (Tissue:root) | 46.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 30.961 |
| SRR9715740 | Leave | 35.424 |
| SRR9715741 | Leave | 38.222 |
| SRR9715739 | Root | 49.655 |
| SRR9715742 | Root | 42.883 |
| SRR9715743 | Root | 48.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.273 |
| SRR8749028 | MeJA induced 9h | 25.665 |
| SRR8749029 | MeJA induced 9h | 17.611 |
| SRR8749030 | Uninduced | 17.913 |
| SRR8749031 | Uninduced | 14.927 |
| SRR8749032 | Uninduced | 18.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 46.163 |
| SRR8400027 | Control-Root | 44.955 |