Gene detail information of Glyur000172s00014917.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G46270.12.00E-46G-box binding factor 3
NRBAD42432.15.73E-174bZip transcription factor [Psophocarpus tetragonolobus]
Swissprottr|Q99089|CPRF1_PETCR4.00E-99Common plant regulatory factor 1
trEMBLtr|Q68AN1|Q68AN1_PSOTE2.00E-174BZip transcription factor {ECO:0000313|EMBL:BAD42432.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00172258959263513+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000172s00014917.1PF07777.6MFMR12004.00E-63
Glyur000172s00014917.1PF00170.16bZIP_12983241.50E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.462
SRR1783600control8.636
SRR1783602moderate drought stress11.011
SRR1811619moderate drought stress10.878

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.436
DRR006520Root Summer glycyrrhizin high producing strain28.409
DRR006521Root Winter glycyrrhizin high producing strain16.209
DRR006522Root Winter glycyrrhizin high producing strain16.009
DRR006523Root Summer glycyrrhizin low producing strain100.405
DRR006524Root Summer glycyrrhizin low producing strain103.073
DRR006525Leaf Summer glycyrrhizin high producing strain5.405
DRR006526Leaf Summer glycyrrhizin high producing strain5.509

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.846
SRR2868004Drought Stress(Tissue:root)22.445
SRR2967015Control (Tissue:root)26.583

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.930
SRR9715740Leave8.079
SRR9715741Leave11.329
SRR9715739Root10.836
SRR9715742Root37.998
SRR9715743Root33.986

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.465
SRR8749028MeJA induced 9h73.152
SRR8749029MeJA induced 9h33.041
SRR8749030Uninduced25.466
SRR8749031Uninduced17.430
SRR8749032Uninduced10.477

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.509
SRR8400027Control-Root21.437

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved