Gene detail information of Glyur000173s00011811.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48300.10ADP glucose pyrophosphorylase 1
NRXP_003601480.10Glucose-1-phosphate adenylyltransferase [Medicago truncatula]
COGYP_007066226.10glucose-1-phosphate adenylyltransferase [Calothrix sp. PCC 7507]
Swissprottr|P52417|GLGS2_VICFA0Glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic (Precursor)
trEMBLtr|G7J834|G7J834_MEDTR0Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001734579253720+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00975glgC EC:2.7.7.27 Starch and sucrose metabolism map00500
Amino sugar and nucleotide sugar metabolismmap00520
Biofilm formation - Escherichia colimap02026


Gene Ontology

biological_process

GO:0005978  glycogen biosynthetic process

GO:0009058  biosynthetic process


molecular_function

GO:0008878  glucose-1-phosphate adenylyltransferase activity

GO:0016779  nucleotidyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000173s00011811.1PF00483.18NTP_transferase923653.00E-71


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control48.067
SRR1783600control48.447
SRR1783602moderate drought stress43.655
SRR1811619moderate drought stress43.478

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain39.438
DRR006520Root Summer glycyrrhizin high producing strain38.352
DRR006521Root Winter glycyrrhizin high producing strain23.236
DRR006522Root Winter glycyrrhizin high producing strain22.529
DRR006523Root Summer glycyrrhizin low producing strain18.300
DRR006524Root Summer glycyrrhizin low producing strain18.110
DRR006525Leaf Summer glycyrrhizin high producing strain71.883
DRR006526Leaf Summer glycyrrhizin high producing strain70.954

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)96.208
SRR2868004Drought Stress(Tissue:root)102.662
SRR2967015Control (Tissue:root)75.038

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave75.148
SRR9715740Leave60.820
SRR9715741Leave86.255
SRR9715739Root26.093
SRR9715742Root46.734
SRR9715743Root46.397

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h100.412
SRR8749028MeJA induced 9h117.675
SRR8749029MeJA induced 9h91.203
SRR8749030Uninduced79.432
SRR8749031Uninduced30.563
SRR8749032Uninduced48.040

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root67.065
SRR8400027Control-Root61.337

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved