Gene detail information of Glyur000173s00011841.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14810.1 | 2.00E-15 | semialdehyde dehydrogenase family protein |
| NR | XP_004503334.1 | 1.52E-19 | PREDICTED: aspartate-semialdehyde dehydrogenase-like [Cicer arietinum] |
| COG | YP_007053779.1 | 1.00E-06 | aspartate-semialdehyde dehydrogenase [Rivularia sp. PCC 7116] |
| trEMBL | tr|V5N8M5|V5N8M5_PHAVU | 3.00E-19 | Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AHA84262.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00173 | 241591 | 242913 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.318 |
| SRR1783600 | control | 4.032 |
| SRR1783602 | moderate drought stress | 4.934 |
| SRR1811619 | moderate drought stress | 4.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.553 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.340 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.854 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.178 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.109 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.588 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.279 |
| SRR2967015 | Control (Tissue:root) | 3.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.538 |
| SRR9715740 | Leave | 1.259 |
| SRR9715741 | Leave | 2.757 |
| SRR9715739 | Root | 0.546 |
| SRR9715742 | Root | 0.974 |
| SRR9715743 | Root | 0.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.258 |
| SRR8749028 | MeJA induced 9h | 3.620 |
| SRR8749029 | MeJA induced 9h | 3.032 |
| SRR8749030 | Uninduced | 2.110 |
| SRR8749031 | Uninduced | 1.326 |
| SRR8749032 | Uninduced | 1.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.714 |
| SRR8400027 | Control-Root | 4.706 |