Gene detail information of Glyur000174s00018490.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24400.10CBL-interacting protein kinase 8
NRXP_003519209.10PREDICTED: CBL-interacting serine/threonine-protein kinase 8 isoform X1 [Glycine max]
COGYP_004571825.13.00E-28serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9STV4|CIPK8_ARATH0CBL-interacting serine/threonine-protein kinase 8
trEMBLtr|G7K600|G7K600_MEDTR0CBL-interacting kinase {ECO:0000313|EMBL:AES98330.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00174228662234411-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000174s00018490.1PF00069.20Pkinase92132.20E-61
Glyur000174s00018490.1PF03822.9NAF2923512.20E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.427
SRR1783600control6.434
SRR1783602moderate drought stress10.948
SRR1811619moderate drought stress11.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.137
DRR006520Root Summer glycyrrhizin high producing strain22.618
DRR006521Root Winter glycyrrhizin high producing strain3.896
DRR006522Root Winter glycyrrhizin high producing strain3.792
DRR006523Root Summer glycyrrhizin low producing strain24.177
DRR006524Root Summer glycyrrhizin low producing strain24.132
DRR006525Leaf Summer glycyrrhizin high producing strain6.508
DRR006526Leaf Summer glycyrrhizin high producing strain6.428

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.678
SRR2868004Drought Stress(Tissue:root)14.760
SRR2967015Control (Tissue:root)16.240

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.739
SRR9715740Leave9.414
SRR9715741Leave10.711
SRR9715739Root1.626
SRR9715742Root7.877
SRR9715743Root5.423

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.455
SRR8749028MeJA induced 9h6.092
SRR8749029MeJA induced 9h2.889
SRR8749030Uninduced1.395
SRR8749031Uninduced0.984
SRR8749032Uninduced0.851

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.026
SRR8400027Control-Root13.921

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved